CDS

Accession Number TCMCG051C25077
gbkey CDS
Protein Id XP_024463110.1
Location join(3825150..3825154,3825269..3825347,3825548..3825652,3826112..3826255,3826803..3827051,3827174..3827305,3827828..3827971)
Gene LOC7488000
GeneID 7488000
Organism Populus trichocarpa

Protein

Length 285aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024607342.1
Definition syntaxin-81 isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category U
Description SNARE-complex protein Syntaxin-18 N-terminus
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08492        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04130        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
map04130        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0031201        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGATTGACAGCTATTATGGCGTCTTTTATTATTCATAAACCACGGCAAAGATCACCGTTTACTAGAGCTGCTCTTAAAACGCTTGAAAGCATTGGAGCATTAGAACAATTTATGTTGAAGCATAGGAAGGATTATGTTGATCTGCATCGTACCACTGAACAGGAGAGGGATAGTATTGAACAAGAGGTTACTGCATTTATTAAAGCATGCAAAGAACAAATTGATATTCTCAAGAATAGCATAAACGATGAAGCAGCAAACACAAAGGGGTGGCTTGGCATCAAGGCTGATACCTCCACCACTGATACTATAGCACACAAACATGGGGTGGTTTTGATTTTAAGTGAGAAACTTCATTCTGTCACTGCACGGTTTGATCAGCTAAGAGCTATACGCTTCCAAGATGCTATTAATAAGAGGATACCAAGAAGAAAACTTAACCGGGCTGCAAATACAAATACAACTACTGTTGATTCCTCTAAAACAAACAATTTAGAGTTCAGTGAACCTGATGACATTCAGCCAGAGTCTCTTAGAGTGCAGCAGCAAGTGTTGGATGATGAGACTCGTGCCCTGCAGGTGGAATTGACTAGTCTTCTAGAAGCAGTTCAAGAAACCGAAACTAAGATGCTGGAAATGTCTGCATTGAATCACCTAATGTCAACGCATGTTCTGCAACAAGCACAACAAATAGAGCTTCTGTATGAGCAGGCAGTTGAAGCTACAAAGAACGTAGAGCTTGGAAACAAAGAGTTGTCTCAGGCAATACAGCGGAATAGCAGTAGCAGGACTTTTCTCTTGCTTTTCCTTTTTGTTCTTACTTTTTCAATCCTCTTTCTGGATTGGTATAGTTGA
Protein:  
MRLTAIMASFIIHKPRQRSPFTRAALKTLESIGALEQFMLKHRKDYVDLHRTTEQERDSIEQEVTAFIKACKEQIDILKNSINDEAANTKGWLGIKADTSTTDTIAHKHGVVLILSEKLHSVTARFDQLRAIRFQDAINKRIPRRKLNRAANTNTTTVDSSKTNNLEFSEPDDIQPESLRVQQQVLDDETRALQVELTSLLEAVQETETKMLEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS